Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs73234625 chr4:16166206 G/A 3.25E-8 516 38.98 41.73 6.07 KM Plot
KIRC rs73234668 chr4:16240306 T/C 9.53E-9 511 39 43.48 6.07 KM Plot
KIRC rs73251064 chr7:198350 C/T 8.25E-6 520 40.6 32.83 3.3 KM Plot
KIRC rs73299926 chr12:32920185 T/C 4.61E-5 524 43.57 29.78 12.83 KM Plot
KIRC rs73344732 chr6:2376824 G/T 9.99E-9 523 40 39.88 12.07 KM Plot
KIRC rs73713531 chr7:99222379 C/T 1.11E-16 524 39.2 47.77 1.97 KM Plot
KIRC rs74164576 chr2:2623605 T/TTTTG 4.62E-5 522 39.23 41.27 8.35 KM Plot
KIRC rs74360642 chr2:2615280 G/T 3.4E-5 525 39.2 44.57 8.35 KM Plot
KIRC rs74671132 chr21:47963485 T/C 1.09E-5 520 39.08 40.6 6.87 KM Plot
KIRC rs74705753 chr22:42201517 A/G 1.22E-12 522 39.23 37.38 2.17 KM Plot
KIRC rs74813731 chr6:2384012 A/T 2.48E-6 518 40 40.6 15.55 KM Plot
KIRC rs74827820 chr11:34770370 A/T 1.42E-7 523 41.73 26.12 3.3 KM Plot
KIRC rs74848608 chr4:147777960 A/T 1.96E-5 523 40 37.77 11.47 KM Plot
KIRC rs74963128 chr21:44319285 G/A 7.63E-10 517 42.75 34.87 7.18 KM Plot
KIRC rs75032008 chr4:16215855 T/C 3.2E-6 527 38.95 46.8 8.22 KM Plot